| # | Team | MP | W/W | W/D | W/L | D/W | D/D | D/L | L/W | L/D | L/L | Pts |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | Yokohama FC | 21 | 4 | 1 | 0 | 7 | 5 | 0 | 1 | 0 | 3 | 42 |
| 2. | Machida | 21 | 5 | 1 | 1 | 6 | 3 | 2 | 0 | 1 | 2 | 38 |
| 3. | Kofu | 21 | 5 | 0 | 0 | 4 | 4 | 2 | 1 | 1 | 4 | 35 |
| 4. | Yamaga | 21 | 4 | 3 | 0 | 4 | 2 | 2 | 1 | 3 | 2 | 35 |
| 5. | Oita Trinita | 21 | 8 | 1 | 0 | 2 | 1 | 4 | 1 | 0 | 4 | 35 |
| 6. | Albirex Niigata | 21 | 4 | 0 | 1 | 4 | 4 | 3 | 2 | 0 | 3 | 34 |
| 7. | Omiya Ardija | 21 | 2 | 0 | 1 | 8 | 2 | 3 | 0 | 1 | 4 | 33 |
| 8. | Kanazawa | 21 | 6 | 0 | 1 | 2 | 5 | 2 | 1 | 1 | 3 | 33 |
| 9. | Renofa Yamaguchi | 21 | 6 | 3 | 0 | 2 | 4 | 0 | 0 | 2 | 4 | 33 |
| 10. | Verdy | 21 | 4 | 2 | 1 | 3 | 5 | 1 | 1 | 1 | 3 | 32 |
| 11. | Avispa Fukuoka | 21 | 4 | 0 | 0 | 2 | 5 | 4 | 1 | 2 | 3 | 28 |
| 12. | Kyoto | 21 | 5 | 0 | 0 | 2 | 3 | 3 | 1 | 1 | 6 | 28 |
| 13. | Ehime | 21 | 4 | 1 | 0 | 2 | 4 | 3 | 1 | 1 | 5 | 27 |
| 14. | Mito | 21 | 2 | 0 | 0 | 5 | 3 | 3 | 0 | 2 | 6 | 26 |
| 15. | Okayama | 21 | 3 | 1 | 0 | 4 | 2 | 5 | 0 | 1 | 5 | 25 |
| 16. | Chiba | 21 | 4 | 0 | 1 | 3 | 0 | 4 | 0 | 3 | 6 | 24 |
| 17. | Tochigi SC | 21 | 4 | 1 | 0 | 2 | 5 | 1 | 0 | 0 | 8 | 24 |
| 18. | Montedio Yamagata | 21 | 3 | 0 | 0 | 1 | 7 | 3 | 1 | 0 | 6 | 22 |
| 19. | Gifu | 21 | 3 | 0 | 1 | 2 | 3 | 2 | 1 | 1 | 8 | 22 |
| 20. | Tokushima | 21 | 1 | 1 | 1 | 4 | 3 | 2 | 0 | 2 | 7 | 21 |
| 21. | Kumamoto | 21 | 1 | 1 | 1 | 2 | 2 | 6 | 1 | 0 | 7 | 15 |
| 22. | Kamatamare | 21 | 1 | 1 | 0 | 1 | 2 | 4 | 1 | 2 | 9 | 14 |